The detailed information of tRNA gene sequence


Sequence ID>WENV170229491
Genome IDCEQG01124145
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 253
End posion on genome 328
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
cttcgcctga
tRNA gene sequence
GCGGGTATAGCTCAGCTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCCTGGGTTCAAGT
CCTAGTGCCCGTGCCA
Downstream region at tRNA end position
ggcggatttc
Secondary structure (Cloverleaf model)
>WENV170229491	Trp	CCA
                   a      GCCA ggcggatttc
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G A T C C     A
      C G A        A      | | + | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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