The detailed information of tRNA gene sequence


Sequence ID>WENV170229726
Genome IDCEQG01152525
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2111
End posion on genome 2186
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggtaaagggG
tRNA gene sequence 
GGCCAAAAAGCAAAACTGGTTTTGCATTAGGTTGCAAACCTAAAGGTTATGGGTTCAAGC
CCCATTTTGGCTTGCt
Downstream region at tRNA end position 
ttttgcgggg
Secondary structure (Cloverleaf model)
>WENV170229726	Cys	GCA
                   G      TGCt ttttgcgggg
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          C G
                    A     T A C C C     A
      C A A        A      | | | | |     A
    T       A A C G       A T G G G     C
    G       | | | |                 T T
    G       T T G C
      T T          A     AGGTT
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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