The detailed information of tRNA gene sequence


Sequence ID>WENV170230177
Genome IDCEQH01010195
Search identical group
Phylum/Class[CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 428
End posion on genome 505
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
gccgccggcg
tRNA gene sequence
GGGCCCGTAGGGTAGCTTGGTCCATCCTTCGGCGTTCGGGACGCCGGTACTCCAGTTCAA
ATCTGGGCGGGCCCACCA
Downstream region at tRNA end position
tttcgctgtg
Secondary structure (Cloverleaf model)
>WENV170230177	Pro	CGG
                   g      ACCA tttcgctgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G T C     A
    T C G A        A      + | | | |     A
  T         T G G G       T C C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        T     GTAC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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