The detailed information of tRNA gene sequence


Sequence ID>WENV170231558
Genome IDCEQH01219320
Search identical group
Phylum/Class[CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 161
End posion on genome 75
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatcgatttg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAGGCGCTGGTCTCGAAAACCAGTATTGGATTATTCTAA
TCGTGGGTTCGAATCCCACCCTCTCCGgga
Downstream region at tRNA end position 
gaaactgtat
Secondary structure (Cloverleaf model)
>WENV170231558	Ser	CGA
                   g      Ggga gaaactgtat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TATTGGATTATTCTAATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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