The detailed information of tRNA gene sequence


Sequence ID>WENV170232657
Genome IDCEQI01086780
Search identical group
Phylum/Class[CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 364
End posion on genome 288
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctactttttt
tRNA gene sequence 
AGCGAGGTAGCTCAGGTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCGGGGGTTCAAT
TCCCCCTCTCGCTACTA
Downstream region at tRNA end position 
aaaataatat
Secondary structure (Cloverleaf model)
>WENV170232657	Met	CAT
                   t      ACTA aaaataatat
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T T
                    T     C C C C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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