The detailed information of tRNA gene sequence


Sequence ID>WENV170235606
Genome IDCEQL01101282
Search identical group
Phylum/Class[CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 683
End posion on genome 595
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ttaattgacT
tRNA gene sequence
GGAGAGGTGTCAGAGTGGTCTATCGTGCTACCTTGGAAAGGTAGTGTTGAGTCAAATCAA
CCGGGAGTTCGAATCTCCCTCTCTCCATag
Downstream region at tRNA end position
tatccatatt
Secondary structure (Cloverleaf model)
>WENV170235606	Ser	GGA
                   T      ATag tatccatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C T       G G G A G     C
    G       +   |                   T T
    T       T C G T
      C T A        G     TGTTGAGTCAAATCAACC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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