The detailed information of tRNA gene sequence


Sequence ID>WENV170236229
Genome IDCEQL01174187
Search identical group
Phylum/Class[CEQL] marine metagenome genome assembly TARA_076_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 448
End posion on genome 522
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatcgcatat
tRNA gene sequence 
AGGTCATTGGTGTTAAGGGTAGCATGTCGGACTCCAAATCCGAAGGTACGGGTTCGAATC
CTGTATGACCTGCCA
Downstream region at tRNA end position 
taaatannnn
Secondary structure (Cloverleaf model)
>WENV170236229	Trp	CCA
                   t      GCCA taaatannnn
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     T - A          T A
                    T     T G T C C     A
      A A T        G      | | + | |     G
    G       T G T G       A C G G G     C
    G       + | | +                 T T
    G       G C A T
      T A          G     AGGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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