The detailed information of tRNA gene sequence


Sequence ID>WENV170236679
Genome IDCEQM01003768
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 284
End posion on genome 185
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
ttctttacaa
tRNA gene sequence
GGAAGTGTTTGCACACCTGGTGGTGGCCGCGGTTTTCAAAACCGTAGGGCCGCACGTTAA
CCGTGTGGTCGGTGGGTTCGATTCCCATACACTTCCGCCA
Downstream region at tRNA end position
tttttcttag
Secondary structure (Cloverleaf model)
>WENV170236679	SeC(p)	TCA
                   a      GCCA tttttcttag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    T     T A C C C     A
      C C A        T      + | | | |     G
    T       C A C G       G T G G G     C
    G           | |                 T T
    G       T G G C
      T G G        C     AGGGCCGCACGTTAACCGTGTGGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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