The detailed information of tRNA gene sequence


Sequence ID>WENV170238796
Genome IDCEQM01246333
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 617
End posion on genome 540
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position
gaccaaattt
tRNA gene sequence
GGGTGTTTAGCTCAGTTGGTTTAGAGCGTTACCTTGACAGGGTAAAAGTCGGGGGTTCGA
ATCCCTCAACACCCACAA
Downstream region at tRNA end position
atttataaca
Secondary structure (Cloverleaf model)
>WENV170238796	Val	GAC
                   t      ACAA atttataaca
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     T - A          T A
                    T     C T C C C     A
    T T G A        A      | + | | |     G
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AAGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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