The detailed information of tRNA gene sequence


Sequence ID>WENV170240992
Genome IDCEQN01186931
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 135
End posion on genome 60
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ttttaacctt
tRNA gene sequence
AGGGGTGTAGCTCAGCTGGAAGAGCGGCGGTCTCCAAAACCGTAGGTCCGGGGTTCGAGC
CCTCGCACCCCTGCCA
Downstream region at tRNA end position
gagttcaatc
Secondary structure (Cloverleaf model)
>WENV170240992	Trp	CCA
                   t      GCCA gagttcaatc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     G C T C C     A
      C G A        A      | | + | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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