The detailed information of tRNA gene sequence


Sequence ID>WENV170241044
Genome IDCEQN01192162
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 327
End posion on genome 401
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tgtggtatat
tRNA gene sequence
GGCGGCTTAGCTCAGTTGGTTAGAGCACTGGAATCATAATCCAGGTGTCCGGGGTTCGAA
TCCCTGAGCCGCCACat
Downstream region at tRNA end position
cactattgct
Secondary structure (Cloverleaf model)
>WENV170241044	Met	CAT
                   t      ACat cactattgct
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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