The detailed information of tRNA gene sequence


Sequence ID>WENV170241624
Genome IDCEQN01370998
Search identical group
Phylum/Class[CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 175
End posion on genome 250
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
actataaaga
tRNA gene sequence
GGGCCCGTAGCTCAGTGGTTAGAGCGGTCGGCTCATAACCGATTAGTCGCTGGTTCGATC
CCAGCCGGGCCCACCA
Downstream region at tRNA end position
aaataaggac
Secondary structure (Cloverleaf model)
>WENV170241624	Met	CAT
                   a      ACCA aaataaggac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TAGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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