The detailed information of tRNA gene sequence


Sequence ID>WENV170245619
Genome IDCEQP01110240
Search identical group
Phylum/Class[CEQP] marine metagenome genome assembly TARA_076_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 114
End posion on genome 38
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gctccaccat
tRNA gene sequence
AGGGGAATAGTTCAGCTTGGTAGAACGCTTCGTTTGGGACGAAGAGGTCGCAGGTTCAAA
TCCTGTTTCCCCTACCA
Downstream region at tRNA end position
aaaggaaaat
Secondary structure (Cloverleaf model)
>WENV170245619	Pro	TGG
                   t      ACCA aaaggaaaat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C T T G       G C A G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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