The detailed information of tRNA gene sequence


Sequence ID>WENV170250249
Genome IDCEQS01074022
Search identical group
Phylum/Class[CEQS] marine metagenome genome assembly TARA_072_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 779
End posion on genome 855
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
acatacttaa
tRNA gene sequence
GGGCCTGTAGCTCAGCTGGTTAGAGCAATCCGCTCATAACGGATTGGTCGGGGGTTCAAG
TCCCTCCGGGCCCACCA
Downstream region at tRNA end position
ttttccttat
Secondary structure (Cloverleaf model)
>WENV170250249	Met	CAT
                   a      ACCA ttttccttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    A - T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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