The detailed information of tRNA gene sequence


Sequence ID>WENV170254420
Genome IDCEQV01074812
Search identical group
Phylum/Class[CEQV] marine metagenome genome assembly TARA_072_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 386
End posion on genome 290
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atgagagtgc
tRNA gene sequence 
TGGGGGGTGGTGAAACTGGCAGACACGCCGTCCTGTCTCGACGGTGCCAGCGGCATAGCC
CGCTGGCTTGGGGGTTCGAATCCCTCCCCTCCAGCCA
Downstream region at tRNA end position 
tctctgaggt
Secondary structure (Cloverleaf model)
>WENV170254420	Asp	GTC
                   c      GCCA tctctgaggt
                     T - A
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C A A        G      | + | | |     G
    T       A G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCCAGCGGCATAGCCCGCTGGCTT
                    C - G
                    C - G
                    G - C
                    T - A
                    C - G
                  C       C
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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