The detailed information of tRNA gene sequence


Sequence ID>WENV170265127
Genome IDCERD01110990
Search identical group
Phylum/Class[CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3140
End posion on genome 3065
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGGGCGTAGTGCAGTCGGTAGCGTGCCACGTTTTGCACCTGGATGTCGCTGGTTCGAAT
CCAGTCGCCCCGGCCA
Downstream region at tRNA end position 
aaagccctcc
Secondary structure (Cloverleaf model)
>WENV170265127	Gln	TTG
                   n      GCCA aaagccctcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        A      + | | | |     G
    C       C G T G       G C T G G     C
    G       | | + +                 T T
    G       G C G T
      T A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    C   C
                    G - C
                  T       A
                  T       C
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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