The detailed information of tRNA gene sequence


Sequence ID>WENV170265577
Genome IDCERD01224069
Search identical group
Phylum/Class[CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1349
End posion on genome 1274
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
ctgtctagtc
tRNA gene sequence
GGGCGAGTCGTCTAGCCTGGTCTTGGACATCGCTCTCACACAGCGAAGGCCGAGGGTTCG
AATCCCTCCTCGCCCAtac
Downstream region at tRNA end position
cttgagataa
Secondary structure (Cloverleaf model)
>WENV170265577	Val	CAC
                   c      Atac cttgagataa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       G A G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T T        A     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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