The detailed information of tRNA gene sequence


Sequence ID>WENV170267048
Genome IDCERE01180066
Search identical group
Phylum/Class[CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 240
End posion on genome 316
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gcagagttct
tRNA gene sequence
GCCGGTGTAGCTCAGTTGGTTAGAGCACGCGGCTCATATCCGCGGCGTCCGGGGTTCAAG
TCCCTGCACCGGCACCA
Downstream region at tRNA end position
tcttttttgg
Secondary structure (Cloverleaf model)
>WENV170267048	Met	CAT
                   t      ACCA tcttttttgg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GCGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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