The detailed information of tRNA gene sequence


Sequence ID>WENV170267220
Genome IDCERF01030800
Search identical group
Phylum/Class[CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 908
End posion on genome 984
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgccaactac
tRNA gene sequence
GGGCCTGTAGTTCAGTTGGTTAGAGCAGTCGCCTCATAAGCGATTAGTCCTCGGTTCGAG
TCCGAGCGGGCCCACCA
Downstream region at tRNA end position
aataaacgga
Secondary structure (Cloverleaf model)
>WENV170267220	Met	CAT
                   c      ACCA aataaacgga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T T G       C T C G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     TAGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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