The detailed information of tRNA gene sequence


Sequence ID>WENV170267363
Genome IDCERF01081040
Search identical group
Phylum/Class[CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2840
End posion on genome 2925
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacccaccaa
tRNA gene sequence 
GGAAGGTTCCGCTAAGTGGTTGGCAATCCGGTTTGAACCCGGAGGTGCGTTAACGCGTAG
GGGTTCGACTCCTCAACCTTCCGCCA
Downstream region at tRNA end position 
aatagcccta
Secondary structure (Cloverleaf model)
>WENV170267363	Ser	TGA
                   a      GCCA aatagcccta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T C
                    T     A C T C C     A
      G A A        C        | + | |     G
    T       T C G C       A G G G G     C
    G       + | |                   T T
    G       G G C A
      T T          A     GGTGCGTTAACGCGT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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