The detailed information of tRNA gene sequence


Sequence ID>WENV170267376
Genome IDCERF01081220
Search identical group
Phylum/Class[CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 401
End posion on genome 328
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagtaactta
tRNA gene sequence 
TGCGGAATAGAGAAAGGGCATCTCACAAGGCTCATAACCTTGGGTTCCGGGTTCGAATCC
CGGTTCCGCTACCA
Downstream region at tRNA end position 
atttgattcg
Secondary structure (Cloverleaf model)
>WENV170267376	Met	CAT
                   a      ACCA atttgattcg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G G C C C     A
        A A        A      | | | | |     G
      G     A G A G       C C G G G     C
      G     | | | |                 T T
      G     T C T C
        C A        A     GGTT
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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