The detailed information of tRNA gene sequence


Sequence ID>WENV170269304
Genome IDCERH01089671
Search identical group
Phylum/Class[CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2232
End posion on genome 2308
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttagtcagg
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
ataataatgt
Secondary structure (Cloverleaf model)
>WENV170269304	Met	CAT
                   g      ACCA ataataatgt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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