The detailed information of tRNA gene sequence


Sequence ID>WENV170272449
Genome IDCERK01101266
Search identical group
Phylum/Class[CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 180
End posion on genome 255
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
tgtgtaatca
tRNA gene sequence
GCCCTCTTAGCTAAGTGGTCTAAGGCGCCTCACTTGTAATGAGGAGATTTCGCAAGTTCG
AATCTTGCAGGGGGCAtat
Downstream region at tRNA end position
tacttttttt
Secondary structure (Cloverleaf model)
>WENV170272449	Thr	TGT
                   a      Atat tacttttttt
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C G T T C     A
      T G A        A      | | | | |     G
    G       A T C G       G C A A G     C
    G         + | |                 T T
    T       A G G C
      C T A        G     AGATTTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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