The detailed information of tRNA gene sequence


Sequence ID>WENV170274978
Genome IDCERM01055918
Search identical group
Phylum/Class[CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 279
End posion on genome 366
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
acaaagttta
tRNA gene sequence
GGTGGGCTGGCTGAGCGGTCGAAAGCGGCGGTCTTGAAAACCGTTGAGGAGTGATCCTCC
GTAGGTTCGAATCCTACGCCCACCGCCA
Downstream region at tRNA end position
ttttattttt
Secondary structure (Cloverleaf model)
>WENV170274978	Ser	TGA
                   a      GCCA ttttattttt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A T C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAGGAGTGATCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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