The detailed information of tRNA gene sequence


Sequence ID>WENV170275167
Genome IDCERM01069970
Search identical group
Phylum/Class[CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 385
End posion on genome 308
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
caaaaatttt
tRNA gene sequence
CGGGGTGTAGCGTAGTCCGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGCAGGTTCAA
ATCCTGCCACCCCGACAA
Downstream region at tRNA end position
attcaaatta
Secondary structure (Cloverleaf model)
>WENV170275167	Pro	TGG
                   t      ACAA attcaaatta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     A
  C         T G C G       G C A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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