The detailed information of tRNA gene sequence


Sequence ID>WENV170275800
Genome IDCERM01213179
Search identical group
Phylum/Class[CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 101
End posion on genome 177
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position
cgtatccaac
tRNA gene sequence
GGCTCCTTAGCTCAATTGGATAGAGTACTTGCCTTCGAAGCAAGGAGTTACAGGTTCGAG
TCCTGTAGGGGCCGCCA
Downstream region at tRNA end position
ttttctcacg
Secondary structure (Cloverleaf model)
>WENV170275800	Arg	TCG
                   c      GCCA ttttctcacg
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     T G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GAGTT
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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