The detailed information of tRNA gene sequence


Sequence ID>WENV170275997
Genome IDCERM01240978
Search identical group
Phylum/Class[CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 823
End posion on genome 896
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atctaaaaat
tRNA gene sequence 
GACTGTATAGTATAACGGTAGTGCGTAGAGTTGCAACCTCTAAAGTATGTGTTCGATTCA
CATTATAGTCTCAA
Downstream region at tRNA end position 
aatagcccgt
Secondary structure (Cloverleaf model)
>WENV170275997	Cys	GCA
                   t      TCAA aatagcccgt
                     G - C
                     A - T
                     C - G
                     T - A
                     G + T
                     T - A
                     A - T          T T
                    T     T A C A C     A
        A A        A      | | | | |     G
      C     T A T G       A T G T G     C
      G     + | + |                 T T
      G     G T G C
        T A        G     AAGT
                    T - A
                    A - T
                    G - C
                    A - T
                    G - C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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