The detailed information of tRNA gene sequence


Sequence ID>WENV170276230
Genome IDCERN01013914
Search identical group
Phylum/Class[CERN] marine metagenome genome assembly TARA_066_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 200
End posion on genome 124
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagtgtctat
tRNA gene sequence 
AGGGGGATAGCTCAATTGGTCAGAGCACTGGTCTCATAAACCATAGGTTCCGGGTTCAAG
TCCCGGTCCCCCTACCA
Downstream region at tRNA end position 
tgcccgaatg
Secondary structure (Cloverleaf model)
>WENV170276230	Met	CAT
                   t      ACCA tgcccgaatg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     G G C C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTT
                    C   T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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