The detailed information of tRNA gene sequence


Sequence ID>WENV170277232
Genome IDCERP01024606
Search identical group
Phylum/Class[CERP] marine metagenome genome assembly TARA_067_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1559
End posion on genome 1485
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaaatata
tRNA gene sequence 
GGTTTGGTAGTATAATGGTTAGTACCCTAGCTTGTCACGCTAGTAATCGGAGTTCGATTC
TCCGTCAGACCGCCA
Downstream region at tRNA end position 
cataagcgag
Secondary structure (Cloverleaf model)
>WENV170277232	Asp	GTC
                   a      GCCA cataagcgag
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C
                     G + T          T T
                    T     G C C T C     A
      T A A        A      | | | | |     G
    G       T A T G       C G G A G     C
    G       + | | |                 T T
    T       G T A C
      T A          C     TAAT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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