The detailed information of tRNA gene sequence


Sequence ID>WENV170280739
Genome IDCERR01242350
Search identical group
Phylum/Class[CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 657
End posion on genome 728
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgtgttttt
tRNA gene sequence 
TATTGGGTAGCATAACGGTAATGCTTTAAATTGCAAATTTAAACAATGATAGTTCAAATC
TATCCTCAATCTtat
Downstream region at tRNA end position 
taaatcgtgt
Secondary structure (Cloverleaf model)
>WENV170280739	Cys	GCA
                   t      Ttat taaatcgtgt
                     T   C
                     A - T
                     T - A
                     T - A
                     G - C
                     G + T
                     G - C          T A
                    T     C T A T C     A
        A A        A      | | | | |     A
      C     T A C G       G A T A G     C
      G     | | | |                 T T
      G     A T G C
        T A        T     ACAAT
                    T - A
                    T - A
                    A - T
                    A - T
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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