The detailed information of tRNA gene sequence


Sequence ID>WENV170286568
Genome IDCERW01110508
Search identical group
Phylum/Class[CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 295
End posion on genome 220
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ggattcttgT
tRNA gene sequence
GGGTTCGTAGCCTAGCCTGGTAGGGCGATGGTCTCCAAAACCATCGATCGTCGGTTCAAA
TCCGATCGGGCCCATtt
Downstream region at tRNA end position
ttattttatt
Secondary structure (Cloverleaf model)
>WENV170286568	Trp	CCA
                   T      ATtt ttattttatt
                     G - C
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      + | | | |     A
    C       T C C G       G T C G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     CGATC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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