The detailed information of tRNA gene sequence


Sequence ID>WENV170291684
Genome IDCESA01170215
Search identical group
Phylum/Class[CESA] marine metagenome genome assembly TARA_078_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 418
End posion on genome 488
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
ttaccaaaaa
tRNA gene sequence
AGGAGTATAGTTTAATGGTAGAACAACGGTCTTCAAAACCGTATGTGTGGGTTCGATTCC
TTCTACTCTTGata
Downstream region at tRNA end position
ttttcttatt
Secondary structure (Cloverleaf model)
>WENV170291684	SeC	TCA
                   a      Gata ttttcttatt
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T T
                    T     C T T C C     A
        A A        A      |   + | |     G
      T     T T T G       G T G G G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     ATGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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