The detailed information of tRNA gene sequence


Sequence ID>WENV170293100
Genome IDCESB01131909
Search identical group
Phylum/Class[CESB] marine metagenome genome assembly TARA_078_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 387
End posion on genome 311
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ccattaaaag
tRNA gene sequence
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAA
TCCTACCTCCGCTACCA
Downstream region at tRNA end position
tcttttgctc
Secondary structure (Cloverleaf model)
>WENV170293100	Met	CAT
                   g      ACCA tcttttgctc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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