The detailed information of tRNA gene sequence


Sequence ID>WENV170294152
Genome IDCESC01042384
Search identical group
Phylum/Class[CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 193
End posion on genome 104
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
cctcatcggt
tRNA gene sequence
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCATGGGTTCAAATCCCATACCTTCCGCCA
Downstream region at tRNA end position
cgtcgatgac
Secondary structure (Cloverleaf model)
>WENV170294152	Ser	CGA
                   t      GCCA cgtcgatgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    G       G A C C       A T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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