The detailed information of tRNA gene sequence


Sequence ID>WENV170295221
Genome IDCESD01028975
Search identical group
Phylum/Class[CESD] marine metagenome genome assembly TARA_098_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 636
End posion on genome 728
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
atccaggcga
tRNA gene sequence
GGAAGCGTGGGTGAGCTGGTTTAAACCAGGAGTTTGCTAAACTTCCATAGGTGTAACAAT
CTATCAAGAGTTCGAATCTCTTCGCTTCCGCCA
Downstream region at tRNA end position
ggataggtaa
Secondary structure (Cloverleaf model)
>WENV170295221	Ser	GCT
                   a      GCCA ggataggtaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T T C T C     A
    T C G A        G      | | | | |     G
  G         G T G G       A A G A G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CATAGGTGTAACAATCTATC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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