The detailed information of tRNA gene sequence


Sequence ID>WENV170296781
Genome IDCESE01050359
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5825
End posion on genome 5899
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tttttgattT
tRNA gene sequence
TCCTTAATAACACAATCGGTTAGTGTGTCAATCTCATACTTTGAAAATATTGGTTCAATT
CCAGTTTAAGGTATaa
Downstream region at tRNA end position
ttattttgat
Secondary structure (Cloverleaf model)
>WENV170296781	Met	CAT
                   T      ATaa ttattttgat
                     T   T
                     C - G
                     C - G
                     T - A
                     T - A
                     A - T
                     A - T          T T
                    T     T G A C C     A
      T A A        A      | + | | |     A
    C       C A C A       A T T G G     C
    G       | | | |                 T T
    G       G T G T
      T T A        G     AAAT
                    T - A
                    C - G
                    A - T
                    A - T
                    T   T
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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