The detailed information of tRNA gene sequence


Sequence ID>WENV170297013
Genome IDCESE01083296
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3824
End posion on genome 3897
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
agcgttctta
tRNA gene sequence
GGCCGGATAGCATAAAGGTAATGCACGGGACTGCAAATCCTTTGATACCGGTTCAATTCC
GGTTCTGGCTTCCG
Downstream region at tRNA end position
gaatgtggcg
Secondary structure (Cloverleaf model)
>WENV170297013	Cys	GCA
                   a      TCCG gaatgtggcg
                     G + T
                     G - C
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T          T T
                    T     T G G C C     A
        A A        A      | | | | |     A
      A     T A C G       A C C G G     C
      G     | | | |                 T T
      G     A T G C
        T A        A     TGAT
                    C   T
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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