The detailed information of tRNA gene sequence


Sequence ID>WENV170297486
Genome IDCESE01149371
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 8818
End posion on genome 8747
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgttgtgcg
tRNA gene sequence 
AGGAAGGTAGCTCAATGGCAGAGTATTGGTCTCCAAAACCAACGGTTGTGAGTTCGAGTC
TCACTTTTCCTGtat
Downstream region at tRNA end position 
tttatttttt
Secondary structure (Cloverleaf model)
>WENV170297486	Trp	CCA
                   g      Gtat tttatttttt
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     G + T          T G
                    T     C A C T C     A
        A A        A      | | | | |     G
      T     C T C G       G T G A G     C
      G     | | | +                 T T
      G     G A G T
        C A        A     CGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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