The detailed information of tRNA gene sequence


Sequence ID>WENV170297530
Genome IDCESE01186133
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 484
End posion on genome 557
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position
aaaaatttat
tRNA gene sequence
GCGTTCTTAGCTCAATTGGATAGAGCAATAGTTTTCGAAGCTATAGGTTACAAGTTCGAG
TCTTGTAGAGCGTTata
Downstream region at tRNA end position
cgaaggtatc
Secondary structure (Cloverleaf model)
>WENV170297530	Arg	TCG
                   t      Tata cgaaggtatc
                     G + T
                     C - G
                     G - C
                     T + G
                     T - A
                     C - G
                     T - A          T G
                    T     T G T T C     A
      T A A        A      | | | | |     G
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    T - A
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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