The detailed information of tRNA gene sequence


Sequence ID>WENV170297568
Genome IDCESE01220481
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 417
End posion on genome 328
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ttcttttttt
tRNA gene sequence
GGTGGAATGGGTGAGTGGCTTAAACCACCAGTTTGCTAAACTGACGTACGGAGAAATTTG
TACCGGGGGTTCGAATCCCTCTTCCACCACgc
Downstream region at tRNA end position
ttctaagatc
Secondary structure (Cloverleaf model)
>WENV170297568	Ser	GCT
                   t      ACgc ttctaagatc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGAGAAATTTGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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