The detailed information of tRNA gene sequence


Sequence ID>WENV170297665
Genome IDCESE01268117
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1441
End posion on genome 1514
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tttaaaattT
tRNA gene sequence
GGCGGTGTAGTTCAGTGGTAGAACAGTGGAATCATAATTCGCATGTCGTAGGTTCAAGTC
CTACTTTCGCTAAaa
Downstream region at tRNA end position
gtgnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170297665	Met	CAT
                   T      AAaa gtgnnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     T   T
                     G + T          T G
                    T     C A T C C     A
        G A        A      | | | | |     A
      T     C T T G       G T A G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     ATGTC
                    G - C
                    T + G
                    G - C
                    G + T
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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