The detailed information of tRNA gene sequence


Sequence ID>WENV170297733
Genome IDCESE01276597
Search identical group
Phylum/Class[CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1530
End posion on genome 1612
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
atataatatT
tRNA gene sequence
GGAGAGGTATCAGAGCGGTCAAATGAGCTGGGCTGTAAACTCAGTGCTTCGGCTACCTAG
GTTCGAATCCTAGTCTCTCCAAat
Downstream region at tRNA end position
ttacgggatg
Secondary structure (Cloverleaf model)
>WENV170297733	Tyr	GTA
                   T      AAat ttacgggatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G A T C C     A
      C G A        A      | | | | |     G
    G       G A C T       C T A G G     C
    G         | | |                 T T
    T       A T G A
      C A A        G     TGCTTCGGCTAC
                    C - G
                    T - A
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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