The detailed information of tRNA gene sequence


Sequence ID>WENV170298026
Genome IDCESF01037388
Search identical group
Phylum/Class[CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 7412
End posion on genome 7322
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
aatggtatta
tRNA gene sequence
GGAGAGGTGTCCGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGTGCATCAAAAGTGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
ttattatcga
Secondary structure (Cloverleaf model)
>WENV170298026	Ser	GGA
                   a      GCCA ttattatcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTGCATCAAAAGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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