The detailed information of tRNA gene sequence


Sequence ID>WENV170299299
Genome IDCESG01024316
Search identical group
Phylum/Class[CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 317
End posion on genome 244
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttgggta
tRNA gene sequence 
GGGCCTGTAACTCAGCTTGGTAGAGTATCCGACTCATAATCGGGGAGCCACGGGATCGAA
GCCCATCAGGCCCAtta
Downstream region at tRNA end position 
ttttattcca
Secondary structure (Cloverleaf model)
>WENV170299299	Met	CAT
                   a      Atta ttttattcca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          G A
                    T     T A C C C     A
      C G A        A      |   | | |     G
    T       C T C A       A C G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    T + G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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