The detailed information of tRNA gene sequence


Sequence ID>WENV170299941
Genome IDCESG01074604
Search identical group
Phylum/Class[CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 467
End posion on genome 390
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cactaactat
tRNA gene sequence
GTCGATGTAGCTCAGTTGGTTAGTAGCGCCGCACTCATAAAGCGGAGGTCGGAGGTTCAA
ATCCTCCCATCGACACAA
Downstream region at tRNA end position
gcaggaattt
Secondary structure (Cloverleaf model)
>WENV170299941	Met	CAT
                   t      ACAA gcaggaattt
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C C T C C     A
    T T G A        A      | | | | |     A
  G         C T C G       G G A G G     C
  G           | | |                 T T
  T         T A G C
    T A G          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A   A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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