The detailed information of tRNA gene sequence


Sequence ID>WENV170301104
Genome IDCESH01005053
Search identical group
Phylum/Class[CESH] marine metagenome genome assembly TARA_094_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 404
End posion on genome 479
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
aaagtttaac
tRNA gene sequence
GGGGGTTTAGCTCAGTTGGTAGAGCGTCTGCTTTGCAAGCAGAATGTCAACGGTTCGAAT
CCGTTAACCTCCACCA
Downstream region at tRNA end position
attttcaata
Secondary structure (Cloverleaf model)
>WENV170301104	Ala	TGC
                   c      ACCA attttcaata
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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