The detailed information of tRNA gene sequence


Sequence ID>WENV170304497
Genome IDCESI01049028
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1190
End posion on genome 1262
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagcgccaaa
tRNA gene sequence 
GCTGGCTTAGCATAATAGGTAATGCTTTATACTCATACTGTAAACAACGAGAGTTCAAAT
CCCTCAGCCAGCAtag
Downstream region at tRNA end position 
tatgtcaaaa
Secondary structure (Cloverleaf model)
>WENV170304497	Met	CAT
                   a      Atag tatgtcaaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     C T C C C     A
      T A A        A      | | |   |     A
    A       T A C G       G A G A G     C
    G       | | | |                 T T
    G       A T G C
      T A          T     ACAAC
                    T - A
                    T - A
                    A - T
                    T + G
                    A - T
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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