The detailed information of tRNA gene sequence


Sequence ID>WENV170304769
Genome IDCESI01076146
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 587
End posion on genome 514
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtaatatata
tRNA gene sequence 
TTTAAGCTTAGTTTAATTGGTAAAACATGGAACTTCAAATTCTACATTAAAGGTTCAAAA
CCTTTAGCTTATGAatt
Downstream region at tRNA end position 
atttaatatt
Secondary structure (Cloverleaf model)
>WENV170304769	SeC	TCA
                   a      Aatt atttaatatt
                     T + G
                     T   T
                     T - A
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          A A
                    T     T T T C C     A
      T A A        A      | | | | |     A
    T       T T T G       A A A G G     C
    G       | | | |                 T T
    G       A A A C
      T A          A     CATT
                    T - A
                    G + T
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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