The detailed information of tRNA gene sequence


Sequence ID>WENV170305352
Genome IDCESI01138591
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 412
End posion on genome 323
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
aaaagaaacg
tRNA gene sequence
GGAGAGATGGCTGAGCGGTTTAAGGCGCGCGCTTGGAAAGTGTGTGTATTGTCAAAGGTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position
tcaatataac
Secondary structure (Cloverleaf model)
>WENV170305352	Ser	GGA
                   g      GCCA tcaatataac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGTATTGTCAAAGGTACC
                    C - G
                    G + T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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