The detailed information of tRNA gene sequence


Sequence ID>WENV170305834
Genome IDCESI01258427
Search identical group
Phylum/Class[CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 463
End posion on genome 535
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttaaattta
tRNA gene sequence 
AAGAAAATAGTTCAGTCGGTAGAACAGTGGTTTCCAAAACCAAAGGTCAGGGGTTCAATT
CCCTTTTTTCTTGttt
Downstream region at tRNA end position 
gtagacttag
Secondary structure (Cloverleaf model)
>WENV170305834	Trp	CCA
                   a      Gttt gtagacttag
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T T
                    T     T T C C C     A
      T G A        A      | + | | |     A
    C       C T T G       A G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          A     AGGTC
                    G   A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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